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Human Mouse Rhesus
Human: Neonate Human: Infant Human: Child Human: Adolescent Human: Adult Mouse: E12.5 Mouse: E14.5 Mouse: E15.5 Mouse: E16.5-E17.5 Mouse: E17.5-E19.5 Mouse: P0-P3 Mouse: P4-P36 Rhesus: Saccular
Biopsy LCM Single cell Slides Sorted cells Whole lung
AV Misharin Anne Karina Perl Benjamin Izar Bruce Aronow Cecilia Ljungberg Charles Ansong Claire A. Chougnet Darrell N. Kotton Edward E. Morrisey Geremy Clair Gloria Pryhuber James P. Carson Jeffrey A. Whitsett Jianwen Que Jim Hagood Lisa Rutledge Mark A. Krasnow Minzhe Guo Naftali Kaminski Namasivayam Ambalavanan Rusty Lansford Stephen R. Quake Thomas J. Mariani Wei Shi William J. Zacharias Xin Sun Yan Xu
C1 Chromium Single Cell Gene Expression Drop-Seq Infinium MethylationEPIC BeadChip NanoDrop
Dataset Species Stage Cells Explore
Human CellCards Multi-Study CellRef 1.0 Atlas Homo sapiens Adult | Child | Adolescent 505256
Mouse CellCards Multi-Study CellRef 1.0 Atlas Mus musculus E16.5-E17.5 | E17.5-E19.5 | P0-P3 | P4-P36 95658
Single cell transcriptomic signatures of normal human newborn, child and adult lungs Homo sapiens Neonate | Child | Adult 46500
Single-cell RNA-seq analysis of Bronchpulmonary Dysplasia (BPD) Homo sapiens Infant | Child
Single cell transcriptomic profiling identifies molecular phenotypes of newborn human lung cells Homo sapiens Neonate 5499
Systematic identification of 58 lung cell populations in bronchi and parenchyma from 3 normal lungs Homo sapiens Adult 65662
A molecular single-cell lung atlas of lethal COVID-19 Homo sapiens Adult 116314
Single-cell RNA-seq reveals ectopic and aberrant lung-resident cell populations in idiopathic pulmonary fibrosis Homo sapiens Adult 312928
Single-cell RNA-seq of 13 normal, LPS-exposed, or anti-inflammatory treated third trimester Rhesus macaque lungs Macaca mulatta Saccular 120042
The genomic, epigenomic, and biophysical cues controlling the emergence of the lung alveolus Mus musculus E12.5 | E15.5 | E17.5-E19.5 | P0-P3 | P4-P36 67794
Single-cell RNA-Seq on unsorted lung cells from WT E16.5, E18.5, P1, P3, P7, P10, P14, and P28 C57BL6 mice Mus musculus E16.5-E17.5 | E17.5-E19.5 | P0-P3 | P4-P36 996
Culture impact on the transcriptomic programs of primary and iPSC-derived human alveolar type 2 cells Homo sapiens Adult
Single-cell RNA-Seq on unsorted lung cells from WT E16.5 C57BL6 mice Mus musculus E16.5-E17.5 218
Single-cell RNA-Seq on unsorted lung cells from WT E18.5 C57BL6 mice Mus musculus E17.5-E19.5 143
Single-cell RNA-Seq on unsorted lung cells from WT P01 C57BL6 mice Mus musculus P0-P3 130
Single-cell RNA-Seq on unsorted lung cells from WT P03 C57BL6 mice Mus musculus P0-P3 107
Single-cell RNA-Seq on unsorted lung cells from WT P07 C57BL6 mice Mus musculus P4-P36 118
Single-cell RNA-Seq on unsorted lung cells from WT P10 C57BL6 mice Mus musculus P4-P36 75
Single-cell RNA-Seq on unsorted lung cells from WT P14 C57BL6 mice Mus musculus P4-P36 115
Single-cell RNA-Seq on unsorted lung cells from WT P28 C57BL6 mice Mus musculus P4-P36 116
Single-cell RNA-Seq on unsorted lung cells from 1 day old human donor Homo sapiens Neonate 2343
Single-cell RNA-Seq on unsorted lung cells from 1 day old human donor Homo sapiens Neonate 2000
Drop-seq single-cell RNA-Seq on unsorted lung cells from E16.5 mice. Mus musculus E16.5-E17.5 35247
Single-cell RNA-Seq on unsorted lung cells from 21 month old human donor Homo sapiens Child 2000
Drop-seq single-cell RNA-Seq on unsorted lung cells from E18.5 mice. Mus musculus E17.5-E19.5 33441
Single-cell RNA-Seq on unsorted lung cells from 9 year old human donor Homo sapiens Child 2000
Single-cell RNA-Seq on unsorted lung cells from P1 mice. Mus musculus P0-P3 7578
Drop-seq single-cell RNA-Seq on unsorted lung cells from P3 mice. Mus musculus P0-P3 10483
10x single-cell RNA-Seq on unsorted lung cells from 24 year old donor Homo sapiens Adult 6871
Drop-seq single-cell RNA-Seq on unsorted lung cells from P7 mice. Mus musculus P4-P36 12501
Single-Cell Transcriptomic Analysis of Human Lung Reveals Complex Multicellular Changes During Pulmonary Fibrosis II Homo sapiens Adult 76070
Drop-seq single-cell RNA-Seq on unsorted lung cells from P10 mice. Mus musculus P4-P36 13910
Drop-seq single-cell RNA-Seq on unsorted lung cells from P14 mice. Mus musculus P4-P36 8618
Drop-seq single-cell RNA-Seq on unsorted lung cells from P28 mice. Mus musculus P4-P36 7321
Dataset Species Stage Tissue/Cell Type Sample Prep Samples Explore
Time course RNA-seq expression profiling of alveolar parenchyma isolated using laser capture microdissection from wild-type C57BL6 mice. Mus musculus E16.5-E17.5 | E17.5-E19.5 | P0-P3 | P4-P36 Pre-alveolar parenchyma | Alveolar parenchyma LCM 29
RNA-seq profiling of human sorted mixed immune cells (MIC), mixed epithelial cells (EPI), mixed endothelial cells (END) and mixed mesenchymal cells (MES) from combined right upper and right middle lobes or, in the case of the adult lung, the right middle lobe Homo sapiens Neonate | Infant | Child | Adult Mesenchymal cell | Endothelial cell | Epithelial cell | Immune cell | Mixed control cells | Biopsy cells Sorted cells 151
Time course RNA-seq profiling of mouse sorted AT2 cells Mus musculus P4-P36 Type II pneumocyte Sorted cells 2
RNA-seq expression profiling of alveolar parenchyma isolated using laser capture microdissection from human donors Homo sapiens Neonate | Infant | Child Alveolar parenchyma LCM 19
RNA-seq profiling of human sorted mixed immune cells (MIC), mixed epithelial cells (EPI), mixed endothelial cells (END) and mixed mesenchymal cells (MES) from combined right upper and right middle lobes or, in the case of the adult lung, the right middle lobe Homo sapiens Neonate | Infant | Child | Adult Mesenchymal cell | Endothelial cell | Epithelial cell | Immune cell | Mixed control cells | Biopsy cells Sorted cells 81
Time course RNA-seq profiling of mouse sorted Pdgfra+ fibroblasts Mus musculus E16.5-E17.5 | E17.5-E19.5 | P4-P36 Mesenchymal derived cell Sorted cells 4
RNA-seq profiling in sorted pulmonary mesenchyme, endothelial cells, and leukocytes from a 1 day old human donor Homo sapiens Neonate Pulmonary mesenchyme | Endothelial cell | Immune cell Sorted cells 3
Time course RNA-seq profiling in sorted endothelial, epithelial, immune, and mesenchymal-derived cells from WT C57BL6 mice Mus musculus E16.5-E17.5 | E17.5-E19.5 | P4-P36 Endothelial cell | Epithelial cell | Immune cell | Mesenchymal derived cell Sorted cells 26
Time course RNA-seq profiling in whole lung from WT C57BL6 mice Mus musculus E16.5-E17.5 | E17.5-E19.5 | P4-P36 Lung Whole lung 10
RNA-seq profiling in sorted pulmonary mesenchyme, endothelial cells, epithelial cells, and leukocytes from three 20 month old human donors Homo sapiens Child Pulmonary mesenchyme | Endothelial cell | Epithelial cell | Immune cell | Mixed control cells Sorted cells 14
Dataset Species Stage Tissue/Cell Type Sample Prep Samples Explore
Time course NanoString mRNA expression profiling in alveolar parenchyma from WT C57BL6 mice Mus musculus E16.5-E17.5 | P0-P3 | P4-P36 Pre-alveolar parenchyma | Alveolar parenchyma LCM 43
Dataset Species Stage Tissue/Cell Type Sample Prep Samples Explore
Time course NanoString microRNA expression profiling in sorted endothelial cells and type II pneumocytes from WT C57BL6 mice Mus musculus E16.5-E17.5 | E17.5-E19.5 | P0-P3 | P4-P36 Endothelial cell | Type II pneumocyte Sorted cells
Time course NanoString microRNA expression profiling in alveolar parenchyma from human donors Homo sapiens Neonate | Infant | Child Alveolar parenchyma LCM
Time course NanoString microRNA expression profiling in alveolar parenchyma from WT C57BL6 mice Mus musculus E16.5-E17.5 | P0-P3 | P4-P36 Pre-alveolar parenchyma | Alveolar parenchyma LCM 43
Dataset Species Stage Tissue/Cell Type Sample Prep Samples Explore
Proteomic profiling in sorted acinar epithelial cells, endothelial cells, mesenchymal cells, and myeloid cells from twenty month old human donors Homo sapiens Child Mesenchymal cell | Endothelial cell | Epithelial cell | Immune cell Sorted cells 12
Time course proteomic profiling in alveolar parenchyma from WT C57BL6 mice. Mus musculus E16.5-E17.5 | P4-P36 Pre-alveolar parenchyma | Alveolar parenchyma LCM 15
Proteomic Analysis of Human Lung Development Homo sapiens Neonate | Infant | Child Biopsy cells from right middle lobe parenchyma Biopsy
Time course proteomic profiling in whole lung from WT C57BL6 mice Mus musculus E16.5-E17.5 | E17.5-E19.5 | P4-P36 Lung Whole lung 16
Proteomic profiling of human sorted mixed immune cells (MIC), mixed epithelial cells (EPI), mixed endothelial cells (END) and mixed mesenchymal cells (MES) from combined right upper and right middle lobes or, in the case of the adult lung, the right middle lobe Homo sapiens Neonate | Infant | Child | Adult Mesenchymal cell | Endothelial cell | Epithelial cell | Immune cell | Mixed control cells Sorted cells 60
Time course proteomic profiling in sorted endothelial cells and type II pneumocytes from WT C57BL6 mice Mus musculus E16.5-E17.5 | E17.5-E19.5 | P4-P36 Endothelial cell | Type II pneumocyte Sorted cells 32
Proteomic profiling of laser capture microdissection samples of whole lung from human subjects Homo sapiens Neonate | Infant | Child Left lung upper lobe LCM 12
Time course proteomic profiling in alveolar parenchyma from WT C57BL6 mice. Mus musculus E16.5-E17.5 | E17.5-E19.5 | P0-P3 | P4-P36 Pre-alveolar parenchyma | Alveolar parenchyma LCM 45
Proteomic profiling of laser capture microdissection samples of whole lung from human subjects Homo sapiens Neonate | Infant | Child | Adult Left lung upper lobe LCM 19
Proteomic profiling of laser capture microdissection samples of whole lung from human subjects Homo sapiens Neonate | Infant | Child Left lung upper lobe LCM 38
Dataset Species Stage Tissue/Cell Type Sample Prep Samples Explore
Time course metabolomic profiling in whole lung from WT C57BL6 mice Mus musculus E16.5-E17.5 | E17.5-E19.5 | P4-P36 Lung Whole lung 16
Dataset Species Stage Tissue/Cell Type Sample Prep Samples Explore
Lipidomic profiling in sorted acinar epithelial cells, endothelial cells, mesenchymal cells, and myeloid cells from twenty month old human donors Homo sapiens Child Mesenchymal cell | Endothelial cell | Epithelial cell | Immune cell Sorted cells 15
Lipidomic profiling of human sorted mixed immune cells (MIC), mixed epithelial cells (EPI), mixed endothelial cells (END) and mixed mesenchymal cells (MES) from combined right upper and right middle lobes or, in the case of the adult lung, the right middle lobe Homo sapiens Neonate | Infant | Child | Adult Mesenchymal cell | Endothelial cell | Epithelial cell | Immune cell | Mixed control cells | Biopsy cells Sorted cells
Time course lipidomic profiling in whole lung from WT C57BL6 mice Mus musculus E16.5-E17.5 | E17.5-E19.5 | P4-P36 Lung Whole lung 16
Time course lipidomic profiling in sorted endothelial cells and type II pneumocytes from WT C57BL6 mice Mus musculus E17.5-E19.5 | P4-P36 Endothelial cell | Type II pneumocyte Sorted cells 6
Dataset Species Stage Tissue/Cell Type Sample Prep Samples Explore
Time course MeDIP-seq analysis in alveolar parenchyma isolated using laser capture microdissection from wild-type C57BL6 mice. Mus musculus P0-P3 | P4-P36 LCM
Time course MeDIP-seq analysis in sorted cells from wild-type C57BL6 mice. Mus musculus E16.5-E17.5 | E17.5-E19.5 | P4-P36 Endothelial cell | Epithelial cell Sorted cells
Time course MeDIP-seq analysis in sorted cells from wild-type C57BL6 mice. Mus musculus E17.5-E19.5 | P0-P3 | P4-P36 Endothelial cell | Epithelial cell | Mesenchymal derived cell Sorted cells
Infinium MethylationEPIC BeadChip array profiling of laser capture microdissection samples of whole lung from human subjects Homo sapiens Neonate | Infant | Child | Adult LCM 24
Infinium MethylationEPIC BeadChip array profiling of sorted cells from human subjects Homo sapiens Neonate | Infant | Child Mesenchymal cell | Endothelial cell | Epithelial cell Sorted cells
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