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Publications

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Overview of Lung Development in the Newborn Human.
Warburton D
Neonatology, 2017
Temporal, spatial, and phenotypical changes of PDGFRα expressing fibroblasts during late lung development.
Endale M, Ahlfeld S, Bao E, Chen X, Green J, Bess Z, Weirauch MT, Xu Y, Perl AK
Developmental biology, 05 2017
Intestinal commensal bacteria mediate lung mucosal immunity and promote resistance of newborn mice to infection.
Gray J, Oehrle K, Worthen G, Alenghat T, Whitsett J, Deshmukh H
Science translational medicine, 02 2017
Lipidomics reveals dramatic lipid compositional changes in the maturing postnatal lung.
Dautel SE, Kyle JE, Clair G, Sontag RL, Weitz KK, Shukla AK, Nguyen SN, Kim YM, Zink EM, Luders T, Frevert CW, Gharib SA, Laskin J, Carson JP, Metz TO, Corley RA, Ansong C
Scientific reports, 02 2017
Selecting the most appropriate time points to profile in high-throughput studies.
Kleyman M, Sefer E, Nicola T, Espinoza C, Chhabra D, Hagood JS, Kaminski N, Ambalavanan N, Bar-Joseph Z
eLife, 01 2017
Lung Gene Expression Analysis (LGEA): an integrative web portal for comprehensive gene expression data analysis in lung development.
Du Y, Kitzmiller JA, Sridharan A, Perl AK, Bridges JP, Misra RS, Pryhuber GS, Mariani TJ, Bhattacharya S, Guo M, Potter SS, Dexheimer P, Aronow B, Jobe AH, Whitsett JA, Xu Y
Thorax, May 2017
Spatially-Resolved Proteomics: Rapid Quantitative Analysis of Laser Capture Microdissected Alveolar Tissue Samples.
Clair G, Piehowski PD, Nicola T, Kitzmiller JA, Huang EL, Zink EM, Sontag RL, Orton DJ, Moore RJ, Carson JP, Smith RD, Whitsett JA, Corley RA, Ambalavanan N, Ansong C
Scientific reports, 12 2016
SLICE: determining cell differentiation and lineage based on single cell entropy.
Guo M, Bao EL, Wagner M, Whitsett JA, Xu Y
Nucleic acids research, 04 2017
Single-cell RNA sequencing identifies diverse roles of epithelial cells in idiopathic pulmonary fibrosis.
Xu Y, Mizuno T, Sridharan A, Du Y, Guo M, Tang J, Wikenheiser-Brokamp KA, Perl AT, Funari VA, Gokey JJ, Stripp BR, Whitsett JA
JCI insight, 12 2016
Biomarkers associated with bronchopulmonary dysplasia/mortality in premature infants.
Balena-Borneman J, Ambalavanan N, Tiwari HK, Griffin RL, Halloran B, Askenazi D
Pediatric research, 03 2017
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