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Publications

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iDREM: Interactive visualization of dynamic regulatory networks.
Ding J, Hagood JS, Ambalavanan N, Kaminski N, Bar-Joseph Z
PLoS computational biology, 03 2018
Time-resolved proteome profiling of normal lung development.
Moghieb A, Clair G, Mitchell HD, Kitzmiller J, Zink EM, Kim YM, Petyuk V, Shukla A, Moore RJ, Metz TO, Carson J, McDermott JE, Corley RA, Whitsett JA, Ansong C
American journal of physiology. Lung cellular and molecular physiology, 07 2018
Single-Cell Transcriptome Analysis Using SINCERA Pipeline.
Guo M, Xu Y
Methods in molecular biology (Clifton, N.J.), 2018
Regeneration of the lung alveolus by an evolutionarily conserved epithelial progenitor.
Zacharias WJ, Frank DB, Zepp JA, Morley MP, Alkhaleel FA, Kong J, Zhou S, Cantu E, Morrisey EE
Nature, 03 2018
Claudin-18: unexpected regulator of lung alveolar epithelial cell proliferation.
Kotton DN
The Journal of clinical investigation, 03 2018
Runx1 is sufficient for blood cell formation from non-hemogenic endothelial cells only during early embryogenesis.
Yzaguirre AD, Howell ED, Li Y, Liu Z, Speck NA
Development (Cambridge, England), 01 2018
Local and sustained miRNA delivery from an injectable hydrogel promotes cardiomyocyte proliferation and functional regeneration after ischemic injury.
Wang LL, Liu Y, Chung JJ, Wang T, Gaffey AC, Lu M, Cavanaugh CA, Zhou S, Kanade R, Atluri P, Morrisey EE, Burdick JA
Nature biomedical engineering, 2017
Reconstructing differentiation networks and their regulation from time series single-cell expression data.
Ding J, Aronow BJ, Kaminski N, Kitzmiller J, Whitsett JA, Bar-Joseph Z
Genome research, Jan 2018
Maturation of hematopoietic stem cells from prehematopoietic stem cells is accompanied by up-regulation of PD-L1.
Tober J, Maijenburg MMW, Li Y, Gao L, Hadland BK, Gao P, Minoura K, Bernstein ID, Tan K, Speck NA
The Journal of experimental medicine, 02 2018
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