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Publication Page
CellCards
LungMAP Azimuth
Glossary
Explore Data
Omics Data Browser
Visualize Data
OMERO Imaging Browser
Ontology Browser
LGEA Web Portal
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About LungMAP
LungMAP Objectives
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FAQ
Fluidigm C1 + Illumina HiSeq quantitative whole transcriptome analysis of unsorted population of E18.5 lung cells from wild-type C57BL6 mice. (LMEX0000000080)
Jeffrey A. Whitsett (CCHMC) | S. Stephen Potter (CCHMC) | Yan Xu (CCHMC)
How to explore data (tutorial)
Experiment Metadata
Species:
Mus musculus
Experiment Type:
Single-cell RNA-seq
Sample Type:
Single cell
Stages:
E17.5-E19.5
Cell Types:
Ciliated cell
|
Club cell (Clara)
|
Endothelial cell
|
Epithelial-AT1
|
Epithelial-AT2
|
Immune cell
|
Lipofibroblast
|
Matrix fibroblast
|
Myofibroblast/Smooth muscle
Downloads:
BAM Files
|
Data Table
Data
Select a set
AT1 E18.5 Signature Genes
AT1 E18.5 Signature Surface Markers
AT1 E18.5 Signature Transcription Factors
AT2 E18.5 Signature Genes
AT2 E18.5 Signature Surface Markers
AT2 E18.5 Signature Transcription Factors
Ciliated E18.5 Signature Genes
Ciliated E18.5 Signature Surface Markers
Ciliated E18.5 Signature Transcription Factors
Club E18.5 Signature Genes
Club E18.5 Signature Surface Markers
Club E18.5 Signature Transcription Factors
Endothelial E18.5 Signature Genes
Endothelial E18.5 Signature Surface Markers
Endothelial E18.5 Signature Transcription Factors
Lipofibroblast E18.5 Signature Genes
Lipofibroblast E18.5 Signature Transcription Factors
Lipofibroblast E18.5 Signature Surface Markers
Matrix Fibroblast E18.5 Signature Genes
Matrix Fibroblast E18.5 Signature Surface Markers
Matrix Fibroblast E18.5 Signature Transcription Factors
Mouse Pan-Lung Signature Genes
Myeloid E18.5 Signature Genes
Myeloid E18.5 Signature Surface Markers
Myeloid E18.5 Signature Transcription Factors
Myofibroblast E18.5 Signature Genes
Myofibroblast E18.5 Signature Transcription Factors
Myofibroblast E18.5 Signature Surface Markers
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Mean Expression
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Log2
Primary Grouping
Age
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Cell Type
Donor
Secondary Grouping
Age
Age Range
Donor
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Protocols
View:
Analysis pipeline (Sincera)
Mouse Details
LungMAP ID
Alt ID
Species
Sex
Age
Age Group
Weight
Strain
Genotype
LMSP0000000478
LMM.15.96.1
Mus musculus
Female
E18.5
E17.5-E19.5
1.02 g
C57BL6
WT