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Publication Page
CellCards
LungMAP Azimuth
Glossary
Explore Data
Omics Data Browser
Visualize Data
OMERO Imaging Browser
Ontology Browser
LGEA Web Portal
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About LungMAP
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FAQ
Fluidigm C1 + Illumina HiSeq quantitative whole transcriptome analysis of unsorted population of E16.5 lung cells from wild-type C57BL6 mice. (LMEX0000000001)
Jeffrey A. Whitsett (CCHMC) | S. Stephen Potter (CCHMC) | Yan Xu (CCHMC)
How to explore data (tutorial)
Experiment Metadata
Species:
Mus musculus
Experiment Type:
Single-cell RNA-seq
Sample Type:
Single cell
Stages:
E16.5-E17.5
Cell Types:
Endothelial cell
|
Epithelial cell
|
Immune cell
|
Intermediate fibroblast 1
|
Intermediate fibroblast 2
|
Matrix fibroblast
|
Myofibroblast/Smooth muscle
|
Pericyte
|
Proliferative mesenchymal progenitor
Downloads:
BAM Files
|
Data Table
Data
Select a set
Endothelial E16.5 Signature Genes
Endothelial E16.5 Signature Surface Markers
Endothelial E16.5 Signature Transcription Factors
Epithelial E16.5 Signature Genes
Epithelial E16.5 Signature Surface Markers
Epithelial E16.5 Signature Transcription Factors
Intermediate Fibroblast 1 E16.5 Signature Genes
Intermediate Fibroblast 2 E16.5 Signature Genes
Intermediate Fibroblast 1 E16.5 Signature Surface Markers
Intermediate Fibroblast 1 E16.5 Signature Transcription Factors
Intermediate Fibroblast 2 E16.5 Signature Surface Markers
Intermediate Fibroblast 2 E16.5 Signature Transcription Factors
Matrix Fibroblast E16.5 Signature Genes
Matrix Fibroblast E16.5 Signature Surface Markers
Matrix Fibroblast E16.5 Signature Transcription Factors
Mouse Pan-Lung Signature Genes
Myeloid E16.5 Signature Genes
Myeloid E16.5 Signature Surface Markers
Myeloid E16.5 Signature Transcription Factors
Myofibroblast E16.5 Signature Genes
Myofibroblast E16.5 Signature Transcription Factors
Myofibroblast E16.5 Signature Surface Markers
Pericyte E16.5 Signature Genes
Pericyte E16.5 Signature Surface Markers
Pericyte E16.5 Signature Transcription Factors
Proliferative Mesenchymal Progenitor E16.5 Signature Genes
Proliferative Mesenchymal Progenitor E16.5 Signature Transcription Factors
Proliferative Mesenchymal Progenitor E16.5 Signature Surface Markers
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Mean Expression
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Log2
Primary Grouping
Age
Age Range
Cell Type
Donor
Secondary Grouping
Age
Age Range
Donor
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Protocols
View:
Analysis pipeline (Sincera)
Mouse Details
LungMAP ID
Alt ID
Species
Sex
Age
Age Group
Weight
Strain
Genotype
LMSP0000001248
E16.5 Pool
Mus musculus
Female
E16.5
E16.5-E17.5
C57BL6
WT